Journals

  1. M. Rezanejad, J. Wilder, D. B. Walther, A. D. Jepson, S. Dickinson & K. Siddiqi
    Shape-Based Measures Improve Scene Categorization.
    IEEE Transactions on Pattern Analysis and Machine Intelligence , 2023.
    [ Online ]
  2. D. Dileep, T. A. Syed, T. F. W. Sloan, P. S. Dhandapany, K. Siddiqi & M. Sirajuddin
    Cardiomyocyte orientation recovery at micrometer scale reveals long-axis fiber cointinuum in heart walls.
    The EMBO Journal, 42:eT13288, 2023.
    [ Online ]
  3. C, K. Salmon, T. A. Syed, J. B. Kacerovsky et al.
    Organizing principles of astrocytic nanoarchitecture in the mouse cerebral cortex.
    Current Biology , March, 2023.
    [ Online ]
  4. Thierry L. Lefebvre et al.
    Predicting histopathology markers of endometrial carcinoma with a quantitative image analysis approach based on spherical harmonics in multiparametric MRI.
    Diagnostic and Interventional Imaging, March, 2023.
    [ Online]
  5. J. Wilder, M. Rezanejad, S. Dickinson, K. Siddiqi, A. Jepson & D. B. Walther
    Neural Correlates of Local Parallelism During Naturalistic Vision.
    PLOS ONE, January, 2022.
    [Online]
  6. P. Savadjiev, B. Gallix, M. Rezanejad, S. Bhatnagar, A. Semionov, K. Siddiqi, R. Forghani, C. Reinhold, D. H. Eidelman & R. J. Dandurand
    Improved Detection of Chronic Obstructive Pulmonary Disease in Chest CT Using Mean Curvature of Isophotes.
    Radiology: Artificial Intelligence, 4(1), 2021.
    [Online] [Invited Commentary]
  7. Y. Xu, Y. Wang, S. Tsogkas, J. Wan, X. Bai, S. Dickinson & K. Siddiqi
    DeepFlux for Skeleton Detection in the Wild.
    International Journal of Computer Vision, 129, 1323--1339, 2021.
    [Online] © Springer
  8. P. Khandelwal, D. L. Collins & K. Siddiqi
    Spine and Individual Vertebrae Segmentation in Computed Tomography Images Using Geometric Flows and Shape Priors.
    Frontiers in Computer Science, July, 2021.
    [Online]
  9. P. Bohleber, M. Roman, C. Barbante, S. Vascon, K. Siddiqi & M. Pelillo
    Ice Core Science Meets Computer Vision: Challenges and Perspectives.
    Frontiers in Computer Science, June, 2021.
    [Online]
  10. L. Balasubrmamanian et al.
    Association of Plasmodium berghei with the Apical Domain of Hepatocytes is Necessary for the Parasite's Liver Stage Development.
    Frontiers in Cellular and Infection Microbiology, January, 2020.
    [Online]
  11. J. Wilder, M. Rezanejad, S. Dickinson, K Siddiqi, A. Jepson & D.-B. Walther
    Local Contour Symmetry Facilitates Scene Categorization.
    Cognition, 182, 2019.
    [Online] © Elsevier
  12. T. Aumentado-Armstrong, A. Kadivar, P. Savadjiev, S. W. Zucker & K. Siddiqi
    Conduction in the Heart Wall: Helicoidal Fibers Minimize Diffusion Bias.
    Scientific Reports, 8, 7165, 2018.
    [Online] [PDF] © Open Access
  13. T. Aumentado-Armstrong & K. Siddiqi
    Stochastic Heat Kernel Estimation on Sampled Manifolds.
    Computer Graphics Forum, 2017.
    [PDF] © by Computer Graphics Forum.
  14. Kumar, K., C. Desrosiers, K. Siddiqi, O. Colliot & M. Toews
    Fiberprint: A Subject Fingerprint Based on Sparse Code Pooling for White Matter Fiber Analysis.
    NeuroImage, 158:242-259, 2017.
    [PDF] © Elsevier.
  15. M. Rezanejad & K. Siddiqi
    View Sphere Partitioning Via Flux Graphs Boosts Recognition from Sparse Views.
    Frontiers in ICT, 20, November 2015.
    [PDF] © 2015 by Rezanejad and Siddiqi.
  16. Piuze, E., J. Sporring, & K. Siddiqi
    Maurer-Cartan Forms for Fields on Surfaces: Application to Heart Fiber Geometry.
    IEEE Transactions On Pattern Analysis and Machine Intelligence, 37(12):2492-2504, 2015.
    [PDF] © 2015 by IEEE
  17. P. MomayyezSiahkal & K. Siddiqi
    3D Stochastic Completion Fields for Mapping Connectivity in Diffusion MRI.
    IEEE Transactions On Pattern Analysis and Machine Intelligence, 35(4):983-995, 2013.
    [PDF] © 2013 by IEEE
  18. P. Savadjiev, G. J. Strijkers, A. J. Bakermans, E. Piuze, S. W. Zucker & K. Siddiqi
    Heart Wall Myofibers are Arranged in Minimal Surfaces to Optimize Organ Function.
    Proceedings of the National Academy of Science, 109(24):9248-9253, 2012.
    [PDF] © 2012 by PNAS
  19. S. Stolpner, P. Kry & K. Siddiqi
    Medial Spheres for Shape Approximation.
    Pattern Analysis and Machine Intelligence, 34(6):1234-1240, 2012.
    [PDF] © 2012 by IEEE
  20. E. Piuze, P. G. Kry & K. Siddiqi
    Generalized Helicoids for Modeling Hair Geometry
    Computer Graphics Forum, 30: 247-256, 2011.
    [PDF ]
  21. D. Macrini, S. Dickinson, D. Fleet & K. Siddiqi
    Object Categorization Using Bone Graphs.
    Computer Vision and Image Understanding, 15:1187-1206, 2011.
    [PDF] © 2011 by Elsevier
  22. D. Macrini, S. Dickinson, D. Fleet & K. Siddiqi
    Bone Graphs: Medial Shape Parsing and Abstraction.
    Computer Vision and Image Understanding, 15:1044-1061, 2011.
    [PDF] © 2011 by Elsevier
  23. H-E Assemlal, D. Tschumperlé, L. Brun & K. Siddiqi
    Recent Advances in Diffusion MRI Modeling: Angular and Radial Reconstruction.
    Medical Image Analysis, 15(4):369-396, 2011.
    [PDF] © 2011 by Elsevier
  24. S. Stolpner, S. Whitesides & K. Siddiqi
    Sampled Medial Loci for 3D Shape Representation.
    Computer Vision and Image Understanding, 115, 695-706, 2011.
    [PDF] © 2011 by Elsevier
  25. S. McCloskey, M. Langer & K. Siddiqi
    Removal of Partial Occlusion from Single Images
    IEEE Transactions On Pattern Analysis and Machine Intelligence, 33(3):647-654, 2011.
    [PDF ] © 2011 by IEEE
  26. A. Levinshtein, A. Stere, K. N. Kutulakos, D. J. Fleet, S. J. Dickinson & K. Siddiqi
    TurpoPixels: Fast Superpixels Using Geometric Flows
    IEEE Transactions On Pattern Analysis and Machine Intelligence, 31(12), 2009.
    [PDF ] © 2009 by IEEE
  27. C. Lenglet, J. S. W. Campbell, M. Descoteaux, G. Haro, P. Savadjiev, D. Wassermann, A. Anwander, R. Deriche, G. B. Pike, G. Sapiro, K. Siddiqi & P. Thompson
    Mathematical Methods for Diffusion MRI Processing
    NeuroImage, 45(1):S111-S122, 2009.
    [PDF ] © 2009 by Elsevier
  28. P. Savadjiev, J. S. W. Campbell, M. Descoteaux, R. Deriche, G. B. Pike & K. Siddiqi
    Labeling of Ambiguous Sub-voxel Fibre Bundle Configurations in High Angular Resolution Diffusion MRI.
    NeuroImage, 41(1), 58-68, 2008.
    [PDF] © 2008 by Elsevier.
  29. M. Descoteaux, L. Collins & K. Siddiqi
    A Multi-Scale Geometric Flow for Segmenting Vasculature in proton-density weighted MRI.
    Medical Image Analysis, 12(4):497-513, 2008.
    [PDF ] © 2008 by Elsevier.
  30. K. Siddiqi, J. Zhang, D. Macrini, A. Shokoufandeh, S. Bouix & S. Dickinson
    Retrieving Articulated 3D Models Using Medial Surfaces.
    Machine Vision and Applications, 19(4), 261-274, 2008.
    [PDF ] © 2008 by Springer.
  31. I. Reinertsen, M. Descoteaux, K. Siddiqi & D. L. Collins
    Validation of Vessel-Based Registration for Correction of Brain Shift.
    Medical Image Analysis, 11, 374-388, 2007.
    [PDF ] © 2007 by Elsevier.
  32. P. Savadjiev, J. S. W. Campbell, G. B. Pike & K. Siddiqi
    3D Curve Inference for Diffusion MRI Regularization and Fibre Tractography.
    Medical Image Analysis, 10(5), 799-813, 2006.
    [PDF ] © 2006 by Elsevier.
  33. J. S. W. Campbell, K. Siddiqi, V. V. Rymar, A. F. Sadikot & G. B. Pike.
    Flow-based Fibre Tracking with Diffusion Tensor and Q-Ball Data: Validation and Comparison to Principal Diffusion Orientation Techniques.
    Neuroimage, 27(4), 725-736, 2005.
    [PDF ] © 2005 by Elsevier.
  34. A. Shokoufandeh, D. Macrini, S. Dickinson, K. Siddiqi & S. W. Zucker.
    Indexing Hierarchical Structures Using Graph Spectra.
    IEEE Transactions On Pattern Analysis and Machine Intelligence, 27(7), 1125-1140, 2005.
    [PDF ] © 2005 by IEEE.
  35. S. Bouix, K. Siddiqi & A. Tannenbaum.
    Flux Driven Automatic Centerline Extraction.
    Medical Image Analysis, 9(3), 209-221, 2005.
    [PDF ] © 2005 by Elsevier.
  36. S. Bouix, J. Pruessner, D. L. Collins & K. Siddiqi.
    Hippocampal Shape Analysis Using Medial Surfaces.
    Neuroimage, 25(4), 1077-1089, 2005.
    [PDF ] © 2005 by Elsevier.
  37. S. M. Pizer, K. Siddiqi, G. Szekely, J. N. Damon & S. W. Zucker.
    Multiscale Medial Loci and Their Properties.
    International Journal of Computer Vision, 55(2-3), 155-179, 2003.
    [PDF ] © 2003 by Kluwer.
  38. M. Audette, K. Siddiqi, F. P. Ferrie & T. M. Peters.
    An Integrated Range-Sensing, Segmentation and Registration Framework for the Characterization of Intra-surgical Brain Deformations in Image-guided Surgery.
    Computer Vision and Image Understanding, 89(2-3), 226-251, 2003.
    [PDF] © 2003 by Academic. ]
  39. A. Vasilevskiy & K. Siddiqi.
    Flux-Maximizing Geometric Flows
    IEEE Transactions on Pattern Analysis and Machine Intelligence, 24(12), 1565-157 8, 2002.
    [PDF] © 2002 by IEEE.
  40. K. Siddiqi, S. Bouix, A. R. Tannenbaum & S. W. Zucker.
    Hamilton-Jacobi Skeletons.
    International Journal of Computer Vision, 48(3), 215-231, 2002.
    [PDF ] © 2002 by Kluwer.
  41. K. Siddiqi, B. B. Kimia, A. R. Tannenbaum & S. W. Zucker.
    On the Psychophysics of the Shape Triangle.
    Vision Research, 41(9), 1153-1178, 2001.
    [PDF ] © 2001 by Elsevier.
  42. J. August, K. Siddiqi & S. W. Zucker.
    Ligature Instabilities in the Perceptual Organization of Shape.
    Computer Vision and Image Understanding, 76(3), 231-243, 1999.
    [PDF] © 1999 by Academic.
  43. J. August, K. Siddiqi & S. W. Zucker.
    Contour Fragment Grouping and Shared, Simple Occluders.
    Computer Vision and Image Understanding, 76(2), 146-162, 1999.
    [PDF] © 1999 by Academic.
  44. M. Pelillo, K. Siddiqi & S. W. Zucker.
    Matching Hierarchical Structures Using Association Graphs.
    IEEE Transactions on Pattern Analysis and Machine Intelligence, 21(11),1105-1120 , 1999.
    [PDF ] © 1999 by IEEE.
  45. K. Siddiqi, A. Shokoufandeh, S. J. Dickinson & S. W. Zucker.
    Shock Graphs and Shape Matching.
    International Journal of Computer Vision, 35(1), 13-32, 1999.
    [PDF ] © 1999 by Kluwer.
  46. K. Siddiqi, B. B. Kimia, A. R. Tannenbaum & S. W. Zucker.
    Shapes, Shocks and Wiggles.
    Image and Vision Computing Journal, 17, 365-373, 1999.
  47. K. Siddiqi, Y. Berube, A. Tannenbaum, & S. W. Zucker.
    Area and Length Minimizing Flows for Shape Segmentation.
    IEEE Transactions on Image Processing, 7(3), 433-443, 1998.
    [PDF ] © 1998 by IEEE.
  48. K. Siddiqi, B. B. Kimia & C. W. Shu.
    Geometric Shock-Capturing ENO Schemes for Subpixel Interpolation, Computation, and Curve Evolution.
    Graphical Models and Image Processing, 59(5), 278-301, 1997.
    [ TR] © 1997 by Elsevier.
  49. B. B. Kimia & K. Siddiqi.
    Geometric Heat Equation and Nonlinear Diffusion of Shapes and Images.
    Computer Vision and Image Understanding, 64(3), 305-322, 1996.
    [PDF ] © 1996 by Academic.
  50. K. Siddiqi, B. B. Kimia & K. J. Tresness.
    Parts of Visual Form: Psychophysical Aspects.
    Perception, 25(4), 399-424, 1996.
  51. K. Siddiqi & B. B. Kimia.
    Parts of Visual Form: Computational Aspects.
    IEEE Transactions on Pattern Analysis and Machine Intelligence, 17(3), 239-251, 1995.
    [PDF] © 1995 by IEEE.
  52. R. Kimmel, K. Siddiqi, B. B. Kimia & A. Bruckstein
    Shape from shading: Level Set Propagation and Viscosity Solutions.
    International Journal of Computer Vision, 16(2), 107-133, 1995.

Conferences

  1. A. Mondal, V. Jain, K. Siddiqi & S. Ravanbakhsh
    EqR: Equivariant Representations for Data-Efficient Reinforcement Learning.
    International Conference on Machine Learning (ICML, Baltimore, MA), 2022.
    [PDF ] © 2022 by Mondal, Jain, Siddiqi, Ravanbakhsh.
  2. M. Rezanejad, M. Khodadad, H. Mahyar, H. Lombaert, M. Gruninger, D. B. Walther & K. Siddiqi
    Medial Spectral Coordinates for 3D Shape Analysis.
    International Conference on Computer Vision and Pattern Recognition (CVPR, New Orleans, LA), 2022.
    [arXiv version] © 2022 by IEEE.
  3. A. Mondal, V. Jain & K. Siddiqi
    Mini-batch Similarity Graphs for Robust Image Classification.
    British Machine Vision Conference (BMVC, Virtual), 2021.
    [PDF] © by Mondal, Jain & Siddiqi.
  4. C. Wang, B. Samari, V. G. Kim, S. Chaudhuri & K. Siddiqi
    Affinity Graph Supervision for Visual Recognition.
    International Conference on Computer Vision and Pattern Recognition (CVPR, Seattle, WA), 2020.
    [arXiv version] © 2020 by IEEE.
  5. C-O Dufresne Camaro, M. Rezanejad, S. Tsogkas, K. Siddiqi & S. Dickinson
    Appearance Shock Grammar for Fast Medial Axis Extraction from Real Images.
    International Conference on Computer Vision and Pattern Recognition (CVPR, Seattle, WA), 2020.
    [arXiv version] © 2020 by IEEE.
  6. M. Rezanejad, G. Downs, J. Wilder, D.-B. Walther, A, Jepson, S. Dickinson & K. Siddiqi
    Scene Categorization from Contours: Medial Axis Based Salience Measures.
    International Conference on Computer Vision and Pattern Recognition (CVPR, Long Beach, CA), 2019.
    [PDF] © 2019 by IEEE.
  7. Y. Wang, Y. Xu, S. Tsogkas, X. Bai, S. Dickinson & K. Siddiqi
    DeepFlux for Skeletons in the Wild.
    International Conference on Computer Vision and Pattern Recognition (CVPR, Long Beach, CA), 2019.
    [PDF] © 2019 by IEEE.
  8. B. Samari, T. Syed & K. Siddiqi
    Minimizing Non-Holonomicity: Finding Sheets in Fibrous Structures.
    Proceedings of Information Processing in Medical Imaging (IPMI, Hong Kong), 2019.
    [PDF] © 2019 by Springer.
  9. C. Wang, B. Samari & K. Siddiqi
    Local Spectral Graph Convolution for Point Set Feature Learning.
    European Conference on Computer Vision, 2018.
    [PDF] © 2018 by Springer.
  10. B. Samari, T. Aumentado-Armstrong, G. J. Strijkers, M. Froeling & K. Siddiqi
    Denoising Moving Heart Wall Fibers Using Cartan Frames.
    International Conference on Medical Image Computing and Computer-Assisted Intervention, 2017.
    [PDF] © 2017 by Springer.
  11. C. Wang, M. Pelillo & K. Siddiqi
    Dominant Set Clustering and Pooling for Multi-View 3D Object Recognition.
    British Machine Vision Conference (London, UK), 2017.
    [PDF] © 2017 by Wang, Pelillo & Siddiqi.
  12. B. Samari, T. Aumentado-Armstrong, G. Strijkers, M. Froeling & K. Siddiqi
    Cartan Frames for Heart Wall Fiber Motion.
    International Conference on Functional Imaging and Modeling of the Heart, 2017.
    [PDF] © 2017 by Springer.
  13. D. Goblot, M. Pop & K. Siddiqi
    Cartan Frame Analysis of Hearts with Infarcts.
    International Workshop on Statistical Atlases and Computational Models of the Heart, 2016.
    [PDF] © 2016 by Springer.
  14. C. Wang & K. Siddiqi
    Differential Geometry boosts Convolutional Neural Networks for Object Detection.
    Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition Workshops, 2016.
    [PDF] © 2016 by IEEE.
  15. E. Piuze, J. Sporring & K. Siddiqi
    Moving Frames for Heart Fiber Reconstruction.
    International Conference on Information Processing in Medical Imaging, 2015.
    [PDF] © 2015 by Springer.
  16. P. Ablin & K. Siddiqi
    Detecting Myocardial Infarction Using Medial Surfaces.
    International Workshop on Statistical Atlases and Computational Models of the Heart, 2015.
    [PDF] © 2015 by Springer.
  17. M. Rezanejad, B. Samari, I. Rekleitis, K. Siddiqi & G. Dudek
    Robust environment mapping using flux skeletons.
    IEEE/RSJ International Conference on Intelligent Robots and Systems (Hamburg, Germany), 2015.
    [PDF] © 2015 by IEEE.
  18. A. Mensch, E. Piuze, L. Lehnert, A. J. Bakermans, J. Sporring, G. J. Strijkers & K. Siddiqi
    Connection forms for beating the heart.
    International Workshop on Statistical Atlases and Computational Models of the Heart, 2014.
    [PDF] © 2014 by Springer.
  19. M. Bieth, H. Lombaert, A. Reader & K. Siddiqi
    Atlas Construction for dynamic (4D) PET using diffeomorphic transformations.
    International Conference On Medical Image Computing and Computer Assisted Intervention (Nagoya, Japan), 2013.
    [PDF] © 2013 by Springer.
  20. E. Piuze, H. Lombaert, J. Sporring & K. Siddiqi
    Cardiac Fiber Inpainting using Maurer-Cartan Forms.
    International Conference On Medical Image Computing and Computer Assisted Intervention (Nagoya, Japan), 2013.
    [PDF] © 2013 by Springer.
  21. E. Piuze, J. Sporring & K. Siddiqi
    Moving Frames for Heart Fiber Geometry.
    Proceedings of Information Processing in Medical Imaging, 2013.
    [PDF] © 2013 by Springer.
  22. H. Lombaert, J. Sporring & K. Siddiqi
    Diffeomorphic Spectral Matching of Cortical Surfaces.
    Proceedings of Information Processing in Medical Imaging, 2013.
    [PDF] © 2013 by Springer.
  23. E. Piuze, H. Lombaert, J. Sporring, G. Strijkers, A. Bakermans & K. Siddiqi
    Atlases of Cardiac Fiber Differential Structure.
    International Conference On Functional Imaging and Modeling of the Heart (London, UK) , 2013.
    [PDF] © 2013 by Springer.
  24. Campbell, J., P. MamayyezSiahkal, P. Savadjiev, I. R. Leppert, K. Siddiqi, & G. B. Pike
    A new comprehensive framework for probabilistic tractography of fanning fibers.
    Inernational Society for Magnetic Resonance in Medicine Scientific Meeting, 2011.
    [PDF] © 2011 by ISMRM.
  25. H-E. Assemlal, J. Campbell, B. Pike & K. Siddiqi
    Apparent Intravoxel Fibre Population Dispersion (FPD) using Spherical Harmonics.
    International Conference On Medical Image Computing and Computer Assisted Intervention (Toronto, Canada) , 2011.
    [PDF] © 2011 by Springer.
  26. P. MomayyezSiahkal & K. Siddiqi
    Rotation Invariant Completion Fields for Mapping Diffusion MRI Connectivity.
    Proceedings of Information Processing in Medical Imaging, 2011.
    [PDF] © 2011 by Springer.
  27. M. Boucher, A. Evans & K. Siddiqi
    Anisotropic Diffusion of Tensor Fields for Fold Shape Analysis on Surfaces.
    Proceedings of Information Processing in Medical Imaging, 2011.
    [PDF] © 2011 by Springer.
  28. S. Stolpner, K. Siddiqi & S. Whitesides
    Approximating the Medial Axis by Shooting Rays: 3D Case.
    Canadian Computational Geometry Conference, 2011.
    [PDF] .
  29. S. Stolpner, P. Kry & K. Siddiqi
    Medial Spheres for Shape Approximation.
    Symposium on Brain, Body and Machine (Montreal, Canada), 2010.
    [PDF] © 2010 by Springer-Verlag.
  30. M. Boucher, A. Evans & K. Siddiqi
    A Texture Manifold for Curve-Based Morphometry of the Cerebral Cortex.
    MICCAI 2010 Workshop on Medical Computer Vision: Recognition Techniques and Applications in Medical Imaging (Beijing, China), 2010.
    [PDF] © 2010 by Springer-Verlag.
  31. P. Momayyez & K. Siddiqi
    Probabilistic Anatomical Connectivity Using Completion Fields.
    International Conference On Medical Image Computing and Computer Assisted Intervention (Beijing, China), 2010.
    [PDF] © 2010 by Springer-Verlag.
  32. P. Momayyez & K. Siddiqi
    Probabilistic connectivity in fibre tractography.
    International Society For Magnetic Resonance in Medicine Scientific Meeting (Stockholm, Sweden), 2010.
    [PDF] © 2010 by ISMRM.
  33. S. Stolpner, S. Whitesides & K. Siddiqi
    Sampled Medial Loci and Boundary Differential Geometry.
    International Workshop on 3-D Digital Imaging and Modeling (Kyoto), 2009.
    [PDF] © 2009 by IEEE.
  34. P. Momayyez, J. S. W. Campbell, P. Savadjiev, G. B. Pike, & K. Siddiqi
    Beyond crossing fibres: Probabilistic tractography of complex subvoxel fibre geometries
    MICCAI 2009 Workshop on Diffusion Modelling and the Fibre Cup (London), 2009 by Springer.
    [PDF] © 2009.
  35. M. Boucher, A. C. Evans & K. Siddiqi
    Oriented Morphometry of Folds on Surfaces
    Proceedings of Information Processing in Medical Imaging, 2009.
    [PDF] © 2009 by Springer.
  36. P. Momayyez & K. Siddiqi
    3D Stochastic Completion Fields for Fiber Tractography
    IEEE Workshop on Mathematical Methods in Biomedical Image Analysis (Miami Beach), 2009.
    [PDF] © 2009 by IEEE.
  37. P. Savadjiev, J. S. W. Campbell, G. B. Pike & K. Siddiqi
    Streamline flows for white matter fibre pathway segmentation in diffusion MRI.
    International Conference On Medical Image Computing and Computer Assisted Intervention (New York, NY), 2008.
    [PDF] © 2008 by Springer-Verlag.
  38. D. Macrini, K. Siddiqi & S. Dickinson
    From Skeletons to Bone Graphs: Medial Abstraction for Object Recognition.
    International Conference On Computer Vision and Pattern Recognition (Anchorage, Alaska), 2008.
    [PDF] © 2008 by IEEE.
  39. S. McCloskey, M. Langer & K. Siddiqi.
    Evolving Measurement Regions for Depth from Defocus.
    8th Asian Conference on Computer Vision (Tokyo), 2007.
    [PDF] © 2007 by Springer-Verlag.
  40. S. McCloskey, M. Langer & K. Siddiqi.
    Automatic Removal of Partial Occlusion Blur.
    8th Asian Conference on Computer Vision (Tokyo), 2007.
    [PDF] © 2007 by Springer-Verlag.
  41. P. Savadjiev, S. W. Zucker & K. Siddiqi.
    On the Differential Geometry of 3D Flow Patterns: Generalized Helicoids and Diffusion MRI Analysis.
    International Conference on Computer Vision (Rio de Janeiro, Brazil), October 2007.
    [PDF] © 2007 by IEEE.
  42. M. Descoteaux, P. Savadjiev, J. S. W. Campbell, G. B. Pike, K. Siddiqi & R. Deriche.
    Validation and Comparison of Analytical Q-Ball Imaging Methods.
    International Symposium On Biomedical Imaging (Washington, D.C.), April 2007.
    [PDF] © 2007 by IEEE.
  43. C. Phillips & K. Siddiqi.
    Grayscale Photograph Geometry Informed by Dodging and Burning.
    5th Indian Conference on Computer Vision, Graphics and Image Processinig (Madurai, India), December 2006.
    [PDF] © 2006 by Springer-Verlag.
  44. S. McCloskey, M. Langer & K. Siddiqi.
    Seeing Around Occluded Objects.
    18th International Conference on Pattern Recognition (Hong Kong), 2006.
    [PDF] © 2006 by IEEE.
  45. S. McCloskey, M. Langer & K. Siddiqi.
    The Reverse Projection Correlation Principle for Depth from Defocus.
    3rd International Symposium on 3D Data Processing, Visualization and Transmission (Chapel Hill, NC), 2006.
    [PDF] © 2006 by IEEE.
  46. S. Stolpner & K. Siddiqi.
    Revealing Significant Medial Structure in Polyhedral Meshes.
    3rd International Symposium on 3D Data Processing, Visualization and Transmission (Chapel Hill, NC), 2006.
    [PDF] © 2006 by IEEE.
  47. J. S. W. Campbell, P. Savadjiev, K. Siddiqi & G. B. Pike.
    Validation and Regularization in Diffusion MRI Tractography.
    International Symposium On Biomedical Imaging (Washington, DC), 2006.
    [PDF] © 2006 by IEEE.
  48. J. Zhang, K. Siddiqi, D. Macrini, A. Shokoufandeh & S. Dickinson.
    Retrieving Articulated 3-D Models Using Medial Surfaces and their Graph Spectra.
    International Workshop On Energy Minimization Methods in Computer Vision and Pattern Recognition (St. Augustine, Florida), 2005.
    [PDF] © 2005 by Springer-Verlag.
  49. P. Savadjiev, J. S. W. Campbell, G. B. Pike & K. Siddiqi.
    3D Curve Inference for Diffusion MRI Regularization.
    International Conference On Medical Image Computing and Computer Assisted Intervention (Palm Springs, California), 2005.
    Best Student Paper Award.
    [PDF] © 2005 by Springer-Verlag.
  50. M. Descoteaux, M. Audette, K. Chinzei & K. Siddiqi.
    Bone Enhancement Filtering: Application to Sinus Bone Segmentation and Simulation of Pituitary Surgery.
    International Conference On Medical Image Computing and Computer Assisted Intervention (Palm Springs, California), 2005.
    [PDF] © 2005 by Springer-Verlag.
  51. M. Descoteaux, L. Collins & K. Siddiqi.
    Geometric Flows for Segmenting Vasculature in MRI: Theory and Validation.
    International Conference On Medical Image Computing and Computer Assisted Intervention (St. Malo, France), 2004.
    [PDF] © 2004 by Springer-Verlag.
  52. I. Reinertsen, M. Descoteaux, S. Drouin, K. Siddiqi & L. Collins.
    Vessel Driven Correction of Brain Shift.
    International Conference On Medical Image Computing and Computer Assisted Intervention (St. Malo, France), 2004.
    [PDF] © 2004 by Springer-Verlag.
  53. M. Descoteaux, L. Collins & K. Siddiqi
    A Multi-Scale Geometric Flow for Segmenting Vasculature in MRI.
    Computer Vision Approaches to Medical Image Analysis and Mathematical Methods in Biomedical Image Analysis Workshop
    (Prague, Czech Republic)    , 2004.
    [PDF] © 2004 by Springer-Verlag.
  54. J. S. W. Campbell, K. Siddiqi & G. B. Pike.
    Full-brain Q-Ball Imaging in a Clinically Acceptable Time: Application to White Matter Fibre Tractography.
    International Society For Magnetic Resonance in Medicine Scientific Meeting (Kyoto, Japan), 2004.
    [PDF] © 2004 by ISMRM.
  55. J. S. W. Campbell, K. Siddiqi, V. Ryamar, F. Sadikot & G. B. Pike.
    Comparison of Flow- and Streamline-Based Fibre Tracking Algorithms Using an Anisotropic Diffusion Phantom.
    International Society For Magnetic Resonance in Medicine Scientific Meeting (Kyoto, Japan), 2004.
    [PDF] © 2004 by ISMRM.
  56. P. Savadjiev, F. Ferrie & K. Siddiqi.
    Surface Recovery from 3D Point Data Using a Combined Parametric and Geometric Flow Approach.
    International Workshop On Energy Minimization Methods in Computer Vision and Pattern Recognition (Lisbon, Portugal), 2003.
    [PDF] © 2003 by Springer-Verlag.
  57. P. Dimitrov, J. N. Damon & K. Siddiqi.
    Flux Invariants for Shape.
    International Conference On Computer Vision and Pattern Recognition (Madison, Wisconsin), 2003.
    [PDF] © 2003 by IEEE.
  58. S. Bouix, K. Siddiqi & A. Tannenbaum.
    Flux Driven Fly Throughs.
    International Conference On Computer Vision and Pattern Recognition (Madison, Wisconsin), June, 2003.
    [PDF] © 2003 by IEEE.
  59. J. S. W. Campbell, K. Siddiqi, B. C. Vemuri & G. B. Pike.
    A Geometric Flow for White Matter Fibre Tract Reconstruction.
    International Symposium On Biomedical Imaging, July, 2002.
    [PDF] © 2002 by IEEE.
  60. L. Zhu, S. Bouix, S. Haker, K. Siddiqi & A. Tannenbaum.
    Angle-Preserving Mappings for the Visualization of Multi-branched Vessels.
    International Conference On Image Processing (Rochester, New York), 2002.
    [PDF] © 2002 by IEEE.
  61. D. Macrini, A. Shokoufandeh, S. J. Dickinson, K. Siddiqi & S. W. Zucker.
    View-Based 3D Object Recognition Using Shock Graphs.
    International Conference On Pattern Recognition (Quebec City, Quebec, Canada), 2002.
    [PDF] © 2002 by IEEE.
  62. J. S. W. Campbell, K. Siddiqi, Baba C. Vemuri & G. B. Pike.
    A Geometric Flow for White Matter Fibre Tract Reconstruction.
    International Symposium On Biomedical Imaging (Washington, DC), 2002.
    [PDF] © 2002 by IEEE.
  63. S. Bouix, J. Pruessner, D. L. Collins & K. Siddiqi.
    Hippocampal Shape Analysis Using Medial Surfaces.
    International Conference On Medical Image Computing and Computer Assisted Intervention (Utrecht, The Netherlands), 2001.
    [PDF] © 2001 by Springer-Verlag.
  64. K. Siddiqi & A. Vasilevskiy.
    3D Flux Maximizing Flows.
    International Workshop on Energy Minimizing Methods In Computer Vision (Sophia Antipolis, France), 2001.
    [PDF] © 2001 by Springer-Verlag.
  65. A. Vasilevskiy & K. Siddiqi.
    Flux Maximizing Geometric Flows.
    International Conference On Computer Vision (Vancouver, Canada), July, 2001.
    [PDF] © 2001 by IEEE.
  66. M. Bartolli, M. Pelillo, K. Siddiqi, & S. W. Zucker.
    Attributed Tree Homomorphism Using Association Graphs.
    International Conference on Pattern Recognition (Barcelona, Spain), 2000.
    [PDF] © 2000 by IEEE.
  67. S. Bouix & K. Siddiqi
    Divergence-Based Medial Surfaces.
    European Conference on Computer Vision (Dublin, Ireland), 2000.
    [PDF] © 2000 by Springer-Verlag.
  68. P. Dimitrov, C. Phillips & K. Siddiqi.
    Robust and Efficient Skeletal Graphs.
    Conference on Computer Vision and Pattern Recognition (Hilton Head, South Carolina), 2000.
    [PDF] © 2000 by IEEE.
  69. K. Siddiqi, S. Bouix, A. Tannenbaum & S. W. Zucker.
    The Hamilton-Jacobi Skeleton.
    International Conference on Computer Vision (Corfu, Greece), September, 1999.
    [PDF] © 1999 by IEEE.
  70. M. Audette, K. Siddiqi & T. Peters.
    Level-Set Surface Segmentation and Fast Cortical Range Image Tracking
    for Computing Intrasurgical Deformations.
    International Conference on Medical Image Computing and Computer-Assisted Intervention (Cambridge, UK), 1999.
    [PDF] © 1999 by Springer-Verlag.
  71. K. Siddiqi, A. Tannenbaum & S. W. Zucker.
    A Hamiltonian Approach to the Eikonal Equation.
    Workshop on Energy Minimization Methods in Computer Vision and Pattern Recognition (York, UK), 1999.
    [PDF] © 1999 by Springer-Verlag.
  72. J. August, K. Siddiqi & S. W. Zucker.
    Ligature Instabilities in the Perceptual Organization of Shape.
    Conference on Computer Vision and Pattern Recognition (Fort Collins, Colorado), 1999.
    [PDF] © 1999 by IEEE.
  73. A. Shokoufandeh, S. J. Dickinson, K. Siddiqi & S. W. Zucker.
    Indexing using a Spectral Encoding of Topological Structure.
    Conference on Computer Vision and Pattern Recognition (Fort Collins, Colorado), 1999.
    [PDF] © 1999 by IEEE.
  74. M. Pelillo, K. Siddiqi & S. W. Zucker.
    Matching Hierarchical Structures Using Association Graphs.
    Fifth European Conference on Computer Vision (Freiburg, Germany), June, 1998.
    [PDF] © 1998 by Springer-Verlag.
  75. K. Siddiqi, A. Shokoufandeh, S. J. Dickinson & S. W. Zucker.
    Shock Graphs and Shape Matching.
    Sixth International Conference on Computer Vision (Bombay, India), 222-229, 1998.
    [PDF] © 1998 by IEEE.
  76. K. Siddiqi, A. Tannenbaum & S. W. Zucker.
    Hyperbolic ``Smoothing'' of Shapes.
    Sixth International Conference on Computer Vision (Bombay, India), 215-221, 1998.
    [PDF] © 1998 by IEEE.
  77. K. Siddiqi, Y. Berube, A. Tannenbaum, & S. W. Zucker.
    Area and Length Minimizing Flows for Shape Segmentation.
    Conference on Computer Vision and Pattern Recognition (San Juan, Puerto Rico), 621-627, 1997.
    [PDF] © 1997 by IEEE.
  78. J. August, K. Siddiqi & S. W. Zucker.
    Fragment Grouping Via the Principle of Perceptual Occlusion.
    International Conference on Pattern Recognition (Vienna, Austria),1-8, 1996.
    [PDF] © 1996 by IEEE.
  79. K. Siddiqi & B. B. Kimia.
    A Shock Grammar for Recognition.
    Conference on Computer Vision and Pattern Recognition (San Francisco, USA), 507-513, 1996.
    [PDF] © 1996 by IEEE.
  80. K. Siddiqi, B. B. Kimia & C. W. Shu.
    Geometric Shock-Capturing ENO Schemes for Subpixel Interpolation, Computation, and Curve Evolution.
    International Symposium on Computer Vision (Coral Gables, USA), 437-442, 1995.
    [PDF] © 1995 by IEEE.
  81. B. B. Kimia & K. Siddiqi.
    Geometric Heat Equation and Nonlinear Diffusion of Shapes and Images.
    Conference on Computer Vision and Pattern Recognition (Seattle, USA) , 113-120, 1994.
    [PDF] © 1994 by IEEE.
  82. K. Siddiqi & B. B. Kimia.
    Parts of Visual Form: Computational Aspects.
    Conference on Computer Vision and Pattern Recognition (New York, USA) , 75-81, 1993.
    Best Student Paper Award Nomination.
    [PDF] © 1993 by IEEE.

Book Chapters

  1. S. J. Dickinson, A. Shokoufandeh, & K. Siddiqi
    Shock Graph.
    Computer Vision, A Reference Guide, 2014.
    [PDF] © 2014 by Springer.
  2. M. Rezanejad & K. Siddiqi
    Flux Graphs for 2D Shape Analysis.
    Shape Perception in Human and Computer Vision, 2013.
    [PDF] © 2013 by Springer.